Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-2A0A075B638 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4-2A0A075B638 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Gm12527-201ENSMUST00000117967 564 ntBASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Gm16061-201ENSMUST00000122167 857 ntBASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Gm44430-201ENSMUST00000203376 995 ntBASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav4-2A0A075B638 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms