Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav9-1A0A075B601 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav9-1A0A075B601 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9-1A0A075B601 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9-1A0A075B601 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9-1A0A075B601 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Gm15794-201ENSMUST00000120182 631 ntBASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Gm25016-201ENSMUST00000158399 131 ntBASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Gm45328-201ENSMUST00000210942 917 ntBASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-1A0A075B601 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-1A0A075B601 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms