Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm29257-201ENSMUST00000186115 639 ntBASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-1A0A075B5Z8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-1A0A075B5Z8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6-1A0A075B5Z8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-1A0A075B5Z8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-1A0A075B5Z8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6-1A0A075B5Z8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6-1A0A075B5Z8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms