Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Gm28033-201ENSMUST00000184224 96 ntBASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Gm21362-201ENSMUST00000194272 928 ntBASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv4A0A075B5I2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv4A0A075B5I2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Grk6-207ENSMUST00000225925 2769 ntBASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Gm15358-201ENSMUST00000119249 520 ntBASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv4A0A075B5I2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv4A0A075B5I2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms