Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2afb2S4R1M3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2afb2S4R1M3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2afb2S4R1M3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Gm8344-201ENSMUST00000119813 856 ntBASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
H2afb2S4R1M3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb2S4R1M3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms