Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Gm2810-201ENSMUST00000118681 990 ntBASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac6Q9Z2V5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac6Q9Z2V5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 Gm6415-201ENSMUST00000118488 348 ntBASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac6Q9Z2V5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hdac6Q9Z2V5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hdac6Q9Z2V5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.39■□□□□ 0.7
Hdac6Q9Z2V5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hdac6Q9Z2V5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Hdac6Q9Z2V5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hdac6Q9Z2V5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hdac6Q9Z2V5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hdac6Q9Z2V5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Gm16026-204ENSMUST00000162652 683 ntBASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Gm38294-201ENSMUST00000192831 381 ntBASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac6Q9Z2V5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Gm18737-201ENSMUST00000173594 937 ntBASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hdac6Q9Z2V5 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms