Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20bQ9Z104 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmg20bQ9Z104 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hmg20bQ9Z104 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmg20bQ9Z104 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Hmg20bQ9Z104 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmg20bQ9Z104 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.33■□□□□ 0.53
Hmg20bQ9Z104 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.33■□□□□ 0.53
Hmg20bQ9Z104 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm27459-201ENSMUST00000184860 107 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44357-201ENSMUST00000195897 142 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm19658-201ENSMUST00000196231 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44367-201ENSMUST00000196836 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44350-201ENSMUST00000197197 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44390-201ENSMUST00000197533 144 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44313-201ENSMUST00000198018 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44486-201ENSMUST00000198508 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44314-201ENSMUST00000199263 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44394-201ENSMUST00000199558 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44484-201ENSMUST00000199873 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44466-201ENSMUST00000200264 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gm44359-201ENSMUST00000200671 138 ntBASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Hmg20bQ9Z104 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Gm43347-201ENSMUST00000200226 580 ntBASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20bQ9Z104 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Gm27646-201ENSMUST00000183989 110 ntBASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20bQ9Z104 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmg20bQ9Z104 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.3■□□□□ 0.52
Hmg20bQ9Z104 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.3■□□□□ 0.52
Hmg20bQ9Z104 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hmg20bQ9Z104 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmg20bQ9Z104 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmg20bQ9Z104 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms