Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Gm43575-201ENSMUST00000196420 516 ntBASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Smarcb1Q9Z0H3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcb1Q9Z0H3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcb1Q9Z0H3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcb1Q9Z0H3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Smarcb1Q9Z0H3 Gm4995-201ENSMUST00000117247 432 ntBASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Gm27301-201ENSMUST00000184012 127 ntBASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Gm18246-201ENSMUST00000221023 728 ntBASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Smarcb1Q9Z0H3 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Gm13597-201ENSMUST00000121239 375 ntBASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcb1Q9Z0H3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarcb1Q9Z0H3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms