Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CcsQ9WU84 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcsQ9WU84 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CcsQ9WU84 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.13□□□□□ -0.47
CcsQ9WU84 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CcsQ9WU84 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CcsQ9WU84 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.13□□□□□ -0.47
CcsQ9WU84 Gm7638-201ENSMUST00000121348 967 ntBASIC12.13□□□□□ -0.47
CcsQ9WU84 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.13□□□□□ -0.47
CcsQ9WU84 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Gm2274-201ENSMUST00000184539 609 ntBASIC12.13□□□□□ -0.47
CcsQ9WU84 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CcsQ9WU84 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CcsQ9WU84 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.13□□□□□ -0.47
CcsQ9WU84 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CcsQ9WU84 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
CcsQ9WU84 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CcsQ9WU84 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.12□□□□□ -0.47
CcsQ9WU84 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
CcsQ9WU84 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.12□□□□□ -0.47
CcsQ9WU84 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Gm45058-201ENSMUST00000205810 766 ntBASIC12.12□□□□□ -0.47
CcsQ9WU84 Gm18959-201ENSMUST00000208954 655 ntBASIC12.12□□□□□ -0.47
CcsQ9WU84 Gm9731-201ENSMUST00000209480 747 ntBASIC12.12□□□□□ -0.47
CcsQ9WU84 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.12□□□□□ -0.47
CcsQ9WU84 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CcsQ9WU84 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.12□□□□□ -0.47
CcsQ9WU84 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CcsQ9WU84 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.11□□□□□ -0.47
CcsQ9WU84 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.11□□□□□ -0.47
CcsQ9WU84 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CcsQ9WU84 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CcsQ9WU84 Il3ra-202ENSMUST00000223589 738 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms