Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn5Q9WU28 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Actl10-202ENSMUST00000226583 1501 ntBASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn5Q9WU28 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn5Q9WU28 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn5Q9WU28 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms