Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nubp1Q9R060 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nubp1Q9R060 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Nubp1Q9R060 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Nubp1Q9R060 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.64□□□□□ -0.23
Nubp1Q9R060 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.64□□□□□ -0.23
Nubp1Q9R060 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.64□□□□□ -0.23
Nubp1Q9R060 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.64□□□□□ -0.23
Nubp1Q9R060 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.64□□□□□ -0.23
Nubp1Q9R060 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nubp1Q9R060 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.63□□□□□ -0.23
Nubp1Q9R060 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Gm37720-201ENSMUST00000195497 1241 ntBASIC13.63□□□□□ -0.23
Nubp1Q9R060 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.63□□□□□ -0.23
Nubp1Q9R060 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms