Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Crlf1Q9JM58 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Syt7-205ENSMUST00000224135 1557 ntBASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.43□□□□□ -0.42
Crlf1Q9JM58 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Gm28631-201ENSMUST00000190740 334 ntBASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Gm6888-201ENSMUST00000221983 706 ntBASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Crlf1Q9JM58 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Gm8410-201ENSMUST00000117225 605 ntBASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Gm38294-201ENSMUST00000192831 381 ntBASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Gm25857-201ENSMUST00000082788 129 ntBASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Gm10154-201ENSMUST00000084445 354 ntBASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Crlf1Q9JM58 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms