Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sec61a2Q9JLR1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sec61a2Q9JLR1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a2Q9JLR1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a2Q9JLR1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.02□□□□□ -0.16
Sec61a2Q9JLR1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Sec61a2Q9JLR1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a2Q9JLR1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sec61a2Q9JLR1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sec61a2Q9JLR1 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sec61a2Q9JLR1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Gm17971-201ENSMUST00000190239 806 ntBASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sec61a2Q9JLR1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms