Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.4■□□□□ 0.22
Rfx5Q9JL61 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rfx5Q9JL61 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rfx5Q9JL61 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rfx5Q9JL61 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Rfx5Q9JL61 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms