Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Rbfox1Q9JJ43 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rbfox1Q9JJ43 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rbfox1Q9JJ43 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Gm14722-201ENSMUST00000118943 689 ntBASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Gm11950-201ENSMUST00000121615 838 ntBASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Gm25016-201ENSMUST00000158399 131 ntBASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rbfox1Q9JJ43 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 BC037039-201ENSMUST00000192003 2205 ntBASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Gm7367-201ENSMUST00000057611 492 ntBASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rbfox1Q9JJ43 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms