Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Gm6345-202ENSMUST00000180900 204 ntBASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Mir6404-201ENSMUST00000183699 94 ntBASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccl28Q9JIL2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Gm13836-201ENSMUST00000121159 501 ntBASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccl28Q9JIL2 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.58□□□□□ -0.39
Ccl28Q9JIL2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl28Q9JIL2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ccl28Q9JIL2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Gm6257-201ENSMUST00000163864 910 ntBASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccl28Q9JIL2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms