Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gm16215-201ENSMUST00000161990 637 ntBASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gm9824-201ENSMUST00000178707 561 ntBASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gm9794-201ENSMUST00000202370 423 ntBASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gm44855-201ENSMUST00000205725 362 ntBASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Gm18187-201ENSMUST00000196476 984 ntBASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
Nkx2-4Q9EQM3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Nkx2-4Q9EQM3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Gm2810-201ENSMUST00000118681 990 ntBASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nkx2-4Q9EQM3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nkx2-4Q9EQM3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Nkx2-4Q9EQM3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms