Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Vps35Q9EQH3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps35Q9EQH3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps35Q9EQH3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Vps35Q9EQH3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Gm8655-201ENSMUST00000221159 852 ntBASIC15.58■□□□□ 0.08
Vps35Q9EQH3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.58■□□□□ 0.08
Vps35Q9EQH3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Rps4l-201ENSMUST00000071745 943 ntBASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vps35Q9EQH3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm8097-201ENSMUST00000117903 829 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44357-201ENSMUST00000195897 142 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm19658-201ENSMUST00000196231 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44367-201ENSMUST00000196836 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44350-201ENSMUST00000197197 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44390-201ENSMUST00000197533 144 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44313-201ENSMUST00000198018 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44486-201ENSMUST00000198508 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44314-201ENSMUST00000199263 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44394-201ENSMUST00000199558 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44484-201ENSMUST00000199873 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44466-201ENSMUST00000200264 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Gm44359-201ENSMUST00000200671 138 ntBASIC15.56■□□□□ 0.08
Vps35Q9EQH3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.56■□□□□ 0.08
Vps35Q9EQH3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms