Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Gm6226-201ENSMUST00000117765 1146 ntBASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpsf1Q9EPU4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Gm13332-201ENSMUST00000120451 1398 ntBASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Gm15920-201ENSMUST00000118998 402 ntBASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpsf1Q9EPU4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cpsf1Q9EPU4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpsf1Q9EPU4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Gm11025-201ENSMUST00000140773 466 ntBASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpsf1Q9EPU4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Gm11839-201ENSMUST00000120647 1953 ntBASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpsf1Q9EPU4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Gm10154-201ENSMUST00000084445 354 ntBASIC21.23■□□□□ 0.99
Cpsf1Q9EPU4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms