Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Gm5867-201ENSMUST00000063197 592 ntBASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdc40Q9DC48 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Gm15173-201ENSMUST00000122049 433 ntBASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdc40Q9DC48 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdc40Q9DC48 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdc40Q9DC48 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdc40Q9DC48 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.41□□□□□ -0.1
Cdc40Q9DC48 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms