Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp2aQ9DB34 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Gm13418-201ENSMUST00000119097 944 ntBASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp2aQ9DB34 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Gm4535-201ENSMUST00000182274 558 ntBASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Rps4l-201ENSMUST00000071745 943 ntBASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Gm10355-201ENSMUST00000097146 517 ntBASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2aQ9DB34 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms