Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sh2d4aQ9D7V1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sh2d4aQ9D7V1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Sh2d4aQ9D7V1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sh2d4aQ9D7V1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Sh2d4aQ9D7V1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh2d4aQ9D7V1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sh2d4aQ9D7V1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh2d4aQ9D7V1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.08■□□□□ 0
Sh2d4aQ9D7V1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sh2d4aQ9D7V1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sh2d4aQ9D7V1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.08■□□□□ 0
Sh2d4aQ9D7V1 Gm27389-201ENSMUST00000183622 195 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms