Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Grk6-207ENSMUST00000225925 2769 ntBASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
5530400C23RikQ9D3I0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Gm43347-201ENSMUST00000200226 580 ntBASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
5530400C23RikQ9D3I0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Gm34391-201ENSMUST00000203706 907 ntBASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
5530400C23RikQ9D3I0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
5530400C23RikQ9D3I0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
5530400C23RikQ9D3I0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
5530400C23RikQ9D3I0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
5530400C23RikQ9D3I0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
5530400C23RikQ9D3I0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
5530400C23RikQ9D3I0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
5530400C23RikQ9D3I0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.27■□□□□ 0.03
5530400C23RikQ9D3I0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Gm24589-201ENSMUST00000116692 94 ntBASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Gm8097-201ENSMUST00000117903 829 ntBASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Birc2-201ENSMUST00000054878 378 ntBASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
5530400C23RikQ9D3I0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms