Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Stag1Q9D3E6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Gm45747-201ENSMUST00000212203 999 ntBASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.49■□□□□ 0.55
Stag1Q9D3E6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stag1Q9D3E6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Gm5177-201ENSMUST00000183092 997 ntBASIC18.48■□□□□ 0.55
Stag1Q9D3E6 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stag1Q9D3E6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stag1Q9D3E6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Gm18246-201ENSMUST00000221023 728 ntBASIC18.46■□□□□ 0.55
Stag1Q9D3E6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Stag1Q9D3E6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms