Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssr1Q9CY50 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ssr1Q9CY50 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC16.9■□□□□ 0.3
Ssr1Q9CY50 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ssr1Q9CY50 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Gm10231-201ENSMUST00000181584 441 ntBASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Gm10175-202ENSMUST00000208752 441 ntBASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssr1Q9CY50 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssr1Q9CY50 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms