Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Mir449b-201ENSMUST00000104833 80 ntBASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Gm14722-201ENSMUST00000118943 689 ntBASIC19.3■□□□□ 0.68
Nip7Q9CXK8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nip7Q9CXK8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nip7Q9CXK8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Gm22175-201ENSMUST00000175007 78 ntBASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Gm2272-201ENSMUST00000194903 582 ntBASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Gm18057-201ENSMUST00000208220 503 ntBASIC19.28■□□□□ 0.68
Nip7Q9CXK8 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Gm10154-201ENSMUST00000084445 354 ntBASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nip7Q9CXK8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.27■□□□□ 0.68
Nip7Q9CXK8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nip7Q9CXK8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nip7Q9CXK8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Mir7023-201ENSMUST00000185093 64 ntBASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms