Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gm26308-201ENSMUST00000157768 69 ntBASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gm2308-201ENSMUST00000166539 1004 ntBASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gm27646-201ENSMUST00000183989 110 ntBASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 AC151836.1-202ENSMUST00000226259 753 ntBASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 AC107453.4-201ENSMUST00000227068 1817 ntBASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Sec61bQ9CQS8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Gm4913-201ENSMUST00000117075 1290 ntBASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Gm15358-201ENSMUST00000119249 520 ntBASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Mir7036b-201ENSMUST00000184791 63 ntBASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Sec61bQ9CQS8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Gm11185-201ENSMUST00000117732 1007 ntBASIC8.34□□□□□ -1.07
Sec61bQ9CQS8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms