Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Cap2-205ENSMUST00000225824 1634 ntBASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chchd1Q9CQA6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chchd1Q9CQA6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Chchd1Q9CQA6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chchd1Q9CQA6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chchd1Q9CQA6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chchd1Q9CQA6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chchd1Q9CQA6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chchd1Q9CQA6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chchd1Q9CQA6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Gm13234-201ENSMUST00000120010 747 ntBASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Gm5408-201ENSMUST00000197998 747 ntBASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.77□□□□□ -0.53
Chchd1Q9CQA6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.76□□□□□ -0.53
Chchd1Q9CQA6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms