Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm8825-201ENSMUST00000182565 998 ntBASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Gm4518-201ENSMUST00000182638 718 ntBASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H2afb1Q9CQ70 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Gm27742-201ENSMUST00000184667 60 ntBASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H2afb1Q9CQ70 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Gm13836-201ENSMUST00000121159 501 ntBASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Gm7367-201ENSMUST00000057611 492 ntBASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.74□□□□□ -0.37
H2afb1Q9CQ70 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms