Protein–RNA interactions for Protein: Q9CPX6

Atg3, Ubiquitin-like-conjugating enzyme ATG3, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg3Q9CPX6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Atg3Q9CPX6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg3Q9CPX6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atg3Q9CPX6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg3Q9CPX6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Gm8318-201ENSMUST00000182954 872 ntBASIC19.62■□□□□ 0.73
Atg3Q9CPX6 AC124732.2-201ENSMUST00000221977 316 ntBASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.62■□□□□ 0.73
Atg3Q9CPX6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.61■□□□□ 0.73
Atg3Q9CPX6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atg3Q9CPX6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm22065-201ENSMUST00000103753 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm22066-201ENSMUST00000103761 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm24932-201ENSMUST00000103763 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm24115-201ENSMUST00000103799 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm22190-201ENSMUST00000103827 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm22191-201ENSMUST00000103831 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm24721-201ENSMUST00000103849 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm28018-201ENSMUST00000103869 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm26399-201ENSMUST00000103937 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm25349-201ENSMUST00000177728 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm23616-201ENSMUST00000177797 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm25871-201ENSMUST00000177816 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm24752-201ENSMUST00000178240 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm24496-201ENSMUST00000178287 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm25649-201ENSMUST00000178476 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm25548-201ENSMUST00000178681 110 ntBASIC19.6■□□□□ 0.73
Atg3Q9CPX6 Gm23147-201ENSMUST00000178841 110 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms