Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdh23Q99PF4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdh23Q99PF4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.71■□□□□ 0.1
Cdh23Q99PF4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdh23Q99PF4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdh23Q99PF4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdh23Q99PF4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdh23Q99PF4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdh23Q99PF4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdh23Q99PF4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Gm42612-201ENSMUST00000197986 623 ntBASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Gm43170-201ENSMUST00000199827 612 ntBASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Gm2272-201ENSMUST00000194903 582 ntBASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Gm38225-201ENSMUST00000194001 393 ntBASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh23Q99PF4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Gm44344-201ENSMUST00000200287 129 ntBASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Gm15483-201ENSMUST00000120338 456 ntBASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.69■□□□□ 0.1
Cdh23Q99PF4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh23Q99PF4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms