Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Gm25925-201ENSMUST00000158314 306 ntBASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.69■□□□□ 0.26
Tlr3Q99MB1 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.69■□□□□ 0.26
Tlr3Q99MB1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Gm6376-201ENSMUST00000209407 580 ntBASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tlr3Q99MB1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tlr3Q99MB1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tlr3Q99MB1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.65■□□□□ 0.26
Tlr3Q99MB1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.65■□□□□ 0.26
Tlr3Q99MB1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms