Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd2Q99JR8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Gm10499-201ENSMUST00000174094 934 ntBASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Gm25948-201ENSMUST00000175334 112 ntBASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd2Q99JR8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd2Q99JR8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Gm18057-201ENSMUST00000208220 503 ntBASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarcd2Q99JR8 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms