Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdk9Q99J95 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.72■□□□□ 0.11
Cdk9Q99J95 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Gm6433-201ENSMUST00000118634 875 ntBASIC15.71■□□□□ 0.11
Cdk9Q99J95 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk9Q99J95 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
Cdk9Q99J95 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdk9Q99J95 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdk9Q99J95 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Cdk9Q99J95 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.7■□□□□ 0.1
Cdk9Q99J95 Gm13436-201ENSMUST00000120418 567 ntBASIC15.7■□□□□ 0.1
Cdk9Q99J95 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.7■□□□□ 0.1
Cdk9Q99J95 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk9Q99J95 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Gm13559-201ENSMUST00000120476 863 ntBASIC15.69■□□□□ 0.1
Cdk9Q99J95 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms