Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha9Q91Y11 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha9Q91Y11 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdha9Q91Y11 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha9Q91Y11 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha9Q91Y11 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha9Q91Y11 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha9Q91Y11 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pcdha9Q91Y11 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha9Q91Y11 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Gm15173-201ENSMUST00000122049 433 ntBASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Gm6550-201ENSMUST00000187574 993 ntBASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Grk6-207ENSMUST00000225925 2769 ntBASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha9Q91Y11 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha9Q91Y11 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha9Q91Y11 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms