Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhac1Q91Y10 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Asic1-205ENSMUST00000228185 1818 ntBASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Gm44430-201ENSMUST00000203376 995 ntBASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhac1Q91Y10 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhac1Q91Y10 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhac1Q91Y10 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.58□□□□□ -0.07
Pcdhac1Q91Y10 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.58□□□□□ -0.07
Pcdhac1Q91Y10 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhac1Q91Y10 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Pcdhac1Q91Y10 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhac1Q91Y10 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhac1Q91Y10 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.58□□□□□ -0.07
Pcdhac1Q91Y10 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhac1Q91Y10 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Gm27704-201ENSMUST00000185094 107 ntBASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.57□□□□□ -0.08
Pcdhac1Q91Y10 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms