Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb20Q91XZ9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 AC136019.1-201ENSMUST00000226503 1412 ntBASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Gm15173-201ENSMUST00000122049 433 ntBASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Mir5131-201ENSMUST00000175426 93 ntBASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb20Q91XZ9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb20Q91XZ9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdhb20Q91XZ9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Pcdhb20Q91XZ9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb20Q91XZ9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Gm7222-201ENSMUST00000117512 906 ntBASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Gm9440-201ENSMUST00000119667 539 ntBASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Gm44607-201ENSMUST00000205611 1090 ntBASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb20Q91XZ9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Gm14301-201ENSMUST00000120181 324 ntBASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Ap1g1-206ENSMUST00000179104 1096 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms