Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Gm5364-201ENSMUST00000216789 889 ntBASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Gm5867-201ENSMUST00000063197 592 ntBASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ddx41Q91VN6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ddx41Q91VN6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ddx41Q91VN6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Gm6550-201ENSMUST00000187574 993 ntBASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Gm15590-201ENSMUST00000078419 552 ntBASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ddx41Q91VN6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.81■□□□□ 0.44
Ddx41Q91VN6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.81■□□□□ 0.44
Ddx41Q91VN6 AV026068-213ENSMUST00000223675 1171 ntBASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms