Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Snx9Q91VH2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.35■□□□□ 0.21
Snx9Q91VH2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.35■□□□□ 0.21
Snx9Q91VH2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Snx9Q91VH2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Gm13036-201ENSMUST00000117799 748 ntBASIC16.34■□□□□ 0.21
Snx9Q91VH2 Gm1401-201ENSMUST00000122048 772 ntBASIC16.34■□□□□ 0.21
Snx9Q91VH2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.34■□□□□ 0.21
Snx9Q91VH2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Gm18206-201ENSMUST00000207027 926 ntBASIC16.34■□□□□ 0.21
Snx9Q91VH2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Snx9Q91VH2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Snx9Q91VH2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snx9Q91VH2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Snx9Q91VH2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Snx9Q91VH2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Gm5682-201ENSMUST00000173402 505 ntBASIC16.33■□□□□ 0.2
Snx9Q91VH2 Gm43514-201ENSMUST00000198852 424 ntBASIC16.33■□□□□ 0.2
Snx9Q91VH2 AW822252-206ENSMUST00000208904 237 ntBASIC16.33■□□□□ 0.2
Snx9Q91VH2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.33■□□□□ 0.2
Snx9Q91VH2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.33■□□□□ 0.2
Snx9Q91VH2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Snx9Q91VH2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.33■□□□□ 0.2
Snx9Q91VH2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.33■□□□□ 0.2
Snx9Q91VH2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.32■□□□□ 0.2
Snx9Q91VH2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Snx9Q91VH2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms