Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vsx1Q91V10 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vsx1Q91V10 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Vsx1Q91V10 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vsx1Q91V10 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vsx1Q91V10 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Vsx1Q91V10 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Gm23547-201ENSMUST00000158210 271 ntBASIC15.35■□□□□ 0.05
Vsx1Q91V10 Mir6990-201ENSMUST00000183724 91 ntBASIC15.35■□□□□ 0.05
Vsx1Q91V10 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.35■□□□□ 0.05
Vsx1Q91V10 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vsx1Q91V10 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Vsx1Q91V10 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Gm12428-201ENSMUST00000119844 727 ntBASIC15.34■□□□□ 0.05
Vsx1Q91V10 Gm11424-201ENSMUST00000121929 829 ntBASIC15.34■□□□□ 0.05
Vsx1Q91V10 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Gm22175-201ENSMUST00000175007 78 ntBASIC15.34■□□□□ 0.05
Vsx1Q91V10 Gm9682-201ENSMUST00000197505 556 ntBASIC15.34■□□□□ 0.05
Vsx1Q91V10 Gm7787-201ENSMUST00000216858 688 ntBASIC15.34■□□□□ 0.05
Vsx1Q91V10 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vsx1Q91V10 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Vsx1Q91V10 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vsx1Q91V10 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Vsx1Q91V10 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Vsx1Q91V10 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.33■□□□□ 0.04
Vsx1Q91V10 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vsx1Q91V10 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Gm27301-201ENSMUST00000184012 127 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms