Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.33■□□□□ 0.52
StrcQ8VIM6 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.33■□□□□ 0.52
StrcQ8VIM6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.33■□□□□ 0.52
StrcQ8VIM6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
StrcQ8VIM6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
StrcQ8VIM6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
StrcQ8VIM6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.32■□□□□ 0.52
StrcQ8VIM6 Gm3436-201ENSMUST00000179930 840 ntBASIC18.32■□□□□ 0.52
StrcQ8VIM6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.32■□□□□ 0.52
StrcQ8VIM6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
StrcQ8VIM6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
StrcQ8VIM6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Gm12091-201ENSMUST00000146791 830 ntBASIC18.3■□□□□ 0.52
StrcQ8VIM6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
StrcQ8VIM6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Gm21854-201ENSMUST00000179901 471 ntBASIC18.29■□□□□ 0.52
StrcQ8VIM6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.29■□□□□ 0.52
StrcQ8VIM6 Gm9908-201ENSMUST00000211534 448 ntBASIC18.29■□□□□ 0.52
StrcQ8VIM6 Gm18624-201ENSMUST00000220966 658 ntBASIC18.29■□□□□ 0.52
StrcQ8VIM6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
StrcQ8VIM6 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.29■□□□□ 0.52
StrcQ8VIM6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
StrcQ8VIM6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Gm11478-201ENSMUST00000117851 599 ntBASIC18.28■□□□□ 0.52
StrcQ8VIM6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Gm5479-201ENSMUST00000160578 435 ntBASIC18.28■□□□□ 0.52
StrcQ8VIM6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Gm18062-201ENSMUST00000208020 547 ntBASIC18.28■□□□□ 0.52
StrcQ8VIM6 Gm18055-201ENSMUST00000208254 547 ntBASIC18.28■□□□□ 0.52
StrcQ8VIM6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
StrcQ8VIM6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms