Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Gm44492-201ENSMUST00000197012 141 ntBASIC16.52■□□□□ 0.24
TraipQ8VIG6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TraipQ8VIG6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TraipQ8VIG6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
TraipQ8VIG6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TraipQ8VIG6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TraipQ8VIG6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TraipQ8VIG6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TraipQ8VIG6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TraipQ8VIG6 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.52■□□□□ 0.23
TraipQ8VIG6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TraipQ8VIG6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TraipQ8VIG6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TraipQ8VIG6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.5■□□□□ 0.23
TraipQ8VIG6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.5■□□□□ 0.23
TraipQ8VIG6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Gm15427-201ENSMUST00000117288 531 ntBASIC16.5■□□□□ 0.23
TraipQ8VIG6 Gm12008-201ENSMUST00000117791 755 ntBASIC16.5■□□□□ 0.23
TraipQ8VIG6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.5■□□□□ 0.23
TraipQ8VIG6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.5■□□□□ 0.23
TraipQ8VIG6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.5■□□□□ 0.23
TraipQ8VIG6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Gm45747-201ENSMUST00000212203 999 ntBASIC16.5■□□□□ 0.23
TraipQ8VIG6 Chchd1-203ENSMUST00000224633 557 ntBASIC16.5■□□□□ 0.23
TraipQ8VIG6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TraipQ8VIG6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TraipQ8VIG6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms