Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retreg1dQ8VE91 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retreg1dQ8VE91 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retreg1dQ8VE91 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retreg1dQ8VE91 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retreg1dQ8VE91 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.44■□□□□ 0.06
Retreg1dQ8VE91 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retreg1dQ8VE91 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retreg1dQ8VE91 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Gm15173-201ENSMUST00000122049 433 ntBASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Mir6404-201ENSMUST00000183699 94 ntBASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Gm8655-201ENSMUST00000221159 852 ntBASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg1dQ8VE91 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg1dQ8VE91 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg1dQ8VE91 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms