Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp2a1Q8R429 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Atp2a1Q8R429 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atp2a1Q8R429 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atp2a1Q8R429 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Gm9682-201ENSMUST00000197505 556 ntBASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.36■□□□□ 0.37
Atp2a1Q8R429 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.36■□□□□ 0.37
Atp2a1Q8R429 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atp2a1Q8R429 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.34■□□□□ 0.37
Atp2a1Q8R429 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.34■□□□□ 0.37
Atp2a1Q8R429 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp2a1Q8R429 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp2a1Q8R429 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Atp2a1Q8R429 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.33■□□□□ 0.37
Atp2a1Q8R429 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp2a1Q8R429 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp2a1Q8R429 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atp2a1Q8R429 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Atp2a1Q8R429 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atp2a1Q8R429 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atp2a1Q8R429 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms