Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c5Q8R2T8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c5Q8R2T8 Gm43677-201ENSMUST00000198098 2378 ntBASIC18.28■□□□□ 0.52
Gtf3c5Q8R2T8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c5Q8R2T8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c5Q8R2T8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c5Q8R2T8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c5Q8R2T8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Gtf3c5Q8R2T8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c5Q8R2T8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Gm4535-201ENSMUST00000182274 558 ntBASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Mir8098-201ENSMUST00000184011 137 ntBASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Gm28659-201ENSMUST00000188013 759 ntBASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Gm10355-201ENSMUST00000097146 517 ntBASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c5Q8R2T8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gtf3c5Q8R2T8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.27■□□□□ 0.51
Gtf3c5Q8R2T8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.27■□□□□ 0.51
Gtf3c5Q8R2T8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gtf3c5Q8R2T8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gtf3c5Q8R2T8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c5Q8R2T8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Gm18195-201ENSMUST00000207604 706 ntBASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Gtf3c5Q8R2T8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gtf3c5Q8R2T8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gtf3c5Q8R2T8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gtf3c5Q8R2T8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.24■□□□□ 0.51
Gtf3c5Q8R2T8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gtf3c5Q8R2T8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Gtf3c5Q8R2T8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gtf3c5Q8R2T8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms