Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.83■□□□□ 0.76
Chmp7Q8R1T1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp7Q8R1T1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Chmp7Q8R1T1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp7Q8R1T1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.83■□□□□ 0.76
Chmp7Q8R1T1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp7Q8R1T1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Gm10499-201ENSMUST00000174094 934 ntBASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Gm20553-201ENSMUST00000204205 844 ntBASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.82■□□□□ 0.76
Chmp7Q8R1T1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Gm14057-201ENSMUST00000120631 482 ntBASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp7Q8R1T1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Gm16198-201ENSMUST00000118766 670 ntBASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Gm18889-201ENSMUST00000174284 929 ntBASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Rpph1-201ENSMUST00000175096 319 ntBASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Mir6990-201ENSMUST00000183724 91 ntBASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp7Q8R1T1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp7Q8R1T1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms