Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afjQ8R1M2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afjQ8R1M2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
H2afjQ8R1M2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afjQ8R1M2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afjQ8R1M2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afjQ8R1M2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
H2afjQ8R1M2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.49□□□□□ -0.09
H2afjQ8R1M2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afjQ8R1M2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afjQ8R1M2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Gm10231-201ENSMUST00000181584 441 ntBASIC14.47□□□□□ -0.09
H2afjQ8R1M2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Gm5587-201ENSMUST00000206270 674 ntBASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Gm10175-202ENSMUST00000208752 441 ntBASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afjQ8R1M2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms