Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Zcchc9Q8R1J3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Zcchc9Q8R1J3 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.52■□□□□ 0.07
Zcchc9Q8R1J3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Zcchc9Q8R1J3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Zcchc9Q8R1J3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Zcchc9Q8R1J3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Zcchc9Q8R1J3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Zcchc9Q8R1J3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Zcchc9Q8R1J3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Zcchc9Q8R1J3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm8825-201ENSMUST00000182565 998 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm4518-201ENSMUST00000182638 718 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Zcchc9Q8R1J3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Gm5682-201ENSMUST00000173402 505 ntBASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms