Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Gm25948-201ENSMUST00000175334 112 ntBASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vopp1Q8R1C3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vopp1Q8R1C3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Gm15483-201ENSMUST00000120338 456 ntBASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Gm10576-201ENSMUST00000191927 825 ntBASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Gm44872-201ENSMUST00000207864 420 ntBASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vopp1Q8R1C3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Mir449b-201ENSMUST00000104833 80 ntBASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vopp1Q8R1C3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms