Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cystm1Q8K353 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cystm1Q8K353 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Gm12620-201ENSMUST00000119791 1986 ntBASIC9.81□□□□□ -0.84
Cystm1Q8K353 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Gm12612-201ENSMUST00000140182 1986 ntBASIC9.81□□□□□ -0.84
Cystm1Q8K353 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Gm2274-201ENSMUST00000184539 609 ntBASIC9.81□□□□□ -0.84
Cystm1Q8K353 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Gm45058-201ENSMUST00000205810 766 ntBASIC9.81□□□□□ -0.84
Cystm1Q8K353 Gm18959-201ENSMUST00000208954 655 ntBASIC9.81□□□□□ -0.84
Cystm1Q8K353 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 AL590614.2-201ENSMUST00000225374 1937 ntBASIC9.81□□□□□ -0.84
Cystm1Q8K353 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cystm1Q8K353 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Gm13474-201ENSMUST00000122466 815 ntBASIC9.8□□□□□ -0.84
Cystm1Q8K353 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Gm7889-201ENSMUST00000185591 958 ntBASIC9.8□□□□□ -0.84
Cystm1Q8K353 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cystm1Q8K353 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms